| Reservoir | Station ID | Stream Name | Station Description | County Name | Latitude | Longitude |
| Guntersville | GUNM-1 | Crow Ck | approximately 0.5 mile downstream of US Hwy 72 bridge. | Jackson | 34.8367 | -85.8250 |
| Guntersville | GUNM-2 | Coon Ck | approximately 2 miles upstream of lake confluence. | Jackson | 34.7505 | -85.8366 |
| Guntersville | GUNM-4 | Dry Ck | approximately 0.5 mile downstream of Jackson County Park. | Jackson | 34.6323 | -86.0181 |
| Guntersville | GUNM-5 | N Sauty Ck | immediately upstream of AL Hwy 79 bridge. | Jackson | 34.5935 | -86.0914 |
| Guntersville | GUNM-6 | S Sauty Ck | immediately upstream of Co Rd 67 bridge. | Jackson | 34.5192 | -86.1039 |
| Guntersville | GUNM-7 | Town Ck | approximately 0.5 miles downstream of Hwy. 227 bridge. | Marshall | 34.4058 | -86.1832 |
| Guntersville | GUNM-8 | Short Ck | immediately upstream of AL Hwy 227 bridge. | Marshall | 34.3645 | -86.2169 |
| Guntersville | GUNM-9 | Big Spr Ck | immediately upstream of AL Hwy 227 bridge. | Marshall | 34.3452 | -86.2918 |
| Guntersville | GUNM-10 | Browns Ck | approximately 1 mile upstream of Hwy. 69 bridge. | Marshall | 34.3446 | -86.3306 |
| Guntersville | GUNM-11 | Long Island Ck | approximately 0.5 mi upstream from the main reservoir. | Jackson | 34.8991 | -85.7036 |
| Wheeler | WHEL-1 | Paint Rock R | approximately 1 mile upstream of confluence with Tennessee River. | Madison | 34.4832 | -86.4551 |
| Wheeler | WHEL-2 | Flint R | approximately 1 mile upstream of confluence with Tennessee River. | Madison | 34.5107 | -86.5141 |
| Wheeler | WHEL-3 | Indian Ck | One mile upstream of lake confluence. | Madison | 34.5843 | -86.7292 |
| Wheeler | WHEL-4 | Cotaco Ck | immediately upstream of Sharps Ford Bridge. | Morgan | 34.5430 | -86.7263 |
| Wheeler | WHEL-5 | Limestone Ck | approximately 1 mile upstream of confluence with Tennessee River. | Limestone | 34.5933 | -86.8903 |
| Wheeler | WHEL-6 | Flint Ck | One mile downstream of Co Rd 67 bridge at public access area. | Morgan | 34.5589 | -86.9481 |
| Wheeler | WHEL-7 | Dry Br | immediately downstream of Alt. Hwy. 72 bridge. | Morgan | 34.6208 | -87.0006 |
| Wheeler | WHEL-8 | Round Island Ck | approximately 1.5 miles upstream of lake confluence. | Limestone | 34.6986 | -87.0507 |
| Wheeler | WHEL-9 | Spring Ck | approximately 0.5 mile upstream of Co Rd 400 bridge. | Lawrence | 34.7226 | -87.2805 |
| Wheeler | WHEL-10 | Second Ck | approximately 0.5 mile downstream of Hwy 72 bridge. | Lauderdale | 34.8375 | -87.3715 |
| Wheeler | WHEL-11 | Bakers Ck | upstream of Bakers Creek/Tennessee River confluence. | Morgan | 34.6377 | -87.0296 |
| Wheeler | WHEL-13 | Swan Ck | approximately 1 mile downstream of CR 45 bridge. | Limestone | 34.6697 | -87.0023 |